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LoadStructure

megane-viewer

megane-viewer / LoadStructure

Class: LoadStructure

Defined in: pipeline/builder.ts:111

Load a molecular structure file.

Supported formats: PDB, GRO, XYZ, MOL, LAMMPS data.

Ports: out.particle — atom data out.traj — trajectory channel out.cell — simulation cell

Extends​

  • PipelineNode

Constructors​

Constructor​

new LoadStructure(path): LoadStructure

Defined in: pipeline/builder.ts:116

Parameters​

path​

string

Returns​

LoadStructure

Overrides​

PipelineNode.constructor

Properties​

_id​

_id: string | null = null

Defined in: pipeline/builder.ts:83

Inherited from​

PipelineNode._id

_inpPorts​

protected readonly _inpPorts: Record<string, string> = {}

Defined in: pipeline/builder.ts:114

Overrides​

PipelineNode._inpPorts

_outPorts​

protected readonly _outPorts: object

Defined in: pipeline/builder.ts:113

cell​

cell: string = "cell"

particle​

particle: string = "particle"

traj​

traj: string = "trajectory"

Overrides​

PipelineNode._outPorts

nodeType​

readonly nodeType: "load_structure" = "load_structure"

Defined in: pipeline/builder.ts:112

Overrides​

PipelineNode.nodeType

path​

path: string

Defined in: pipeline/builder.ts:116

Accessors​

inp​

Get Signature​

get inp(): PortAccessor

Defined in: pipeline/builder.ts:91

Input port namespace. Access ports via node.inp.portName

Returns​

PortAccessor

Inherited from​

PipelineNode.inp

out​

Get Signature​

get out(): PortAccessor

Defined in: pipeline/builder.ts:86

Output port namespace. Access ports via node.out.portName

Returns​

PortAccessor

Inherited from​

PipelineNode.out

Methods​

_toSerializedParams()​

_toSerializedParams(): object

Defined in: pipeline/builder.ts:120

Serialize node parameters to the SerializedPipeline v3 node dict.

Returns​

object

fileName​

fileName: string

fileUrl​

fileUrl: string

hasCell​

hasCell: boolean = false

hasTrajectory​

hasTrajectory: boolean = false

type​

type: string

Overrides​

PipelineNode._toSerializedParams