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AddPolyhedra

megane-viewer

megane-viewer / AddPolyhedra

Class: AddPolyhedra

Defined in: pipeline/builder.ts:401

Generate coordination polyhedra mesh.

Ports: inp.particle — atom data out.mesh — polyhedra mesh

Extends​

  • PipelineNode

Constructors​

Constructor​

new AddPolyhedra(__namedParameters?): AddPolyhedra

Defined in: pipeline/builder.ts:414

Parameters​

__namedParameters?​
cutoffTolerance?​

number = 1.15

edgeColor?​

string = "#dddddd"

edgeWidth?​

number = 3.0

excludedCenters?​

number[] = []

excludedLigands?​

number[] = []

opacity?​

number = 0.5

showEdges?​

boolean = false

Returns​

AddPolyhedra

Overrides​

PipelineNode.constructor

Properties​

_id​

_id: string | null = null

Defined in: pipeline/builder.ts:83

Inherited from​

PipelineNode._id

_inpPorts​

protected readonly _inpPorts: object

Defined in: pipeline/builder.ts:404

particle​

particle: string = "particle"

Overrides​

PipelineNode._inpPorts

_outPorts​

protected readonly _outPorts: object

Defined in: pipeline/builder.ts:403

mesh​

mesh: string = "mesh"

Overrides​

PipelineNode._outPorts

cutoffTolerance​

cutoffTolerance: number

Defined in: pipeline/builder.ts:408

edgeColor​

edgeColor: string

Defined in: pipeline/builder.ts:411

edgeWidth​

edgeWidth: number

Defined in: pipeline/builder.ts:412

excludedCenters​

excludedCenters: number[]

Defined in: pipeline/builder.ts:406

excludedLigands​

excludedLigands: number[]

Defined in: pipeline/builder.ts:407

nodeType​

readonly nodeType: "polyhedron_generator" = "polyhedron_generator"

Defined in: pipeline/builder.ts:402

Overrides​

PipelineNode.nodeType

opacity​

opacity: number

Defined in: pipeline/builder.ts:409

showEdges​

showEdges: boolean

Defined in: pipeline/builder.ts:410

Accessors​

inp​

Get Signature​

get inp(): PortAccessor

Defined in: pipeline/builder.ts:91

Input port namespace. Access ports via node.inp.portName

Returns​

PortAccessor

Inherited from​

PipelineNode.inp

out​

Get Signature​

get out(): PortAccessor

Defined in: pipeline/builder.ts:86

Output port namespace. Access ports via node.out.portName

Returns​

PortAccessor

Inherited from​

PipelineNode.out

Methods​

_toSerializedParams()​

_toSerializedParams(): object

Defined in: pipeline/builder.ts:441

Serialize node parameters to the SerializedPipeline v3 node dict.

Returns​

object

cutoffTolerance​

cutoffTolerance: number

edgeColor​

edgeColor: string

edgeWidth​

edgeWidth: number

excludedCenters​

excludedCenters: number[]

excludedLigands​

excludedLigands: number[]

opacity​

opacity: number

showEdges​

showEdges: boolean

type​

type: string

Overrides​

PipelineNode._toSerializedParams